BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C12LP1|AL429883
(850 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1362 0.0
>3x_Contig1461
Length = 5478
Score = 1362 bits (686), Expect = 0.0
Identities = 816/854 (95%), Gaps = 5/854 (0%)
Strand = Plus / Plus
Query: 2 tttcactgtataaattgcttatactgagacatgcatggcttaatctttgagacaagcata 61
||||||||||||||||||||||||| | |||||||| ||||||||||| | |||||||||
Sbjct: 1951 tttcactgtataaattgcttatacttatacatgcattgcttaatcttttatacaagcata 2010
Query: 62 tgactactggcaggatcaaccagataactatcttatgaagcagtatccacaagtcttaac 121
| |||||| ||| ||||||||| |||| |||||||||||||||||||||||| |||||||
Sbjct: 2011 taactactcgcaagatcaaccaaataaatatcttatgaagcagtatccacaattcttaac 2070
Query: 122 aacaaatgctgtsaagtcccgcatcaactgtcgcagatattttatcatgattagaaatgc 181
|||||||||| | || ||||||||||||| ||||| |||||||||||| |||| ||||||
Sbjct: 2071 aacaaatgctctcaactcccgcatcaactttcgcatatattttatcattattataaatgc 2130
Query: 182 aagtaaggraacaagtttccatactcgcgtcggaagcaacaattcaacagtttttacact 241
|||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 2131 aagtaaggaaacaattttccatactcgcttcaaaagcaacaattcaacagtttttacact 2190
Query: 242 atcaaatcatcacaacccctccatgccatagcactctttgagtttcctctaaccgacttc 301
|||||||||||||||||||||||| |||||||||||||| | |||||||||||| |||||
Sbjct: 2191 atcaaatcatcacaacccctccattccatagcactctttaattttcctctaaccaacttc 2250
Query: 302 cactgaacactgctccgatgtttcgcagaaacag-aacgttcaatatcat-cggccaaag 359
|||||||||||||||| || ||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 2251 cactgaacactgctccaatttttcgcaaaaacagaaacgttcaatatcatccggccaaag 2310
Query: 360 agg-aggttacactcacagaatcacagacaaccaaagtcgcccggctattctgtaaggca 418
||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 2311 aggaaggttacactcacaaaatcacaaacaaccaaagtcgccccgctattctgtaaggca 2370
Query: 419 ttcccccaaatatggtttctttggtttggattgccattggctagtaatccaccaaatcct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 ttcccccaaatatggtttctttggtttggattgccattggctagtaatccaccaaatcct 2430
Query: 479 ccactgctcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2431 ccactgctcgccaatggaatcgctagatgtccatgacgagactgttcaggcgtcttgcag 2490
Query: 539 catctttcgatgctgcacacacccatgtcaccgcgctgtataggg-cccaggcttgatct 597
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2491 catctttcgatgctgcacacacccatgtcaccgcgctgtatagggccccaggcttgatct 2550
Query: 598 gacgatcacctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacga 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2551 gacgatcacctagaaactctctccaccgcgagacgaggccatagtctgttcgacgaacga 2610
Query: 658 ctacatccaaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2611 ctacatccaaatcttactcaagtttgtttccaaactctttccgattcgtcttcaactgct 2670
Query: 718 ttcgcatgaagtacctcccggcctatttttctcacccgtggtcttctttctattagccct 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671 ttcgcatgaagtacctcccggcctatttttctcacccgtggtcttctttctattagccct 2730
Query: 778 cacg-ttctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttat 836
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2731 cacgtttctatatttcaaaaatgcattcatttttttcatcttctcaataccctctgttat 2790
Query: 837 ttttttcagtattt 850
||||||||||||||
Sbjct: 2791 ttttttcagtattt 2804
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5696
Number of Sequences: 1807
Number of extensions: 5696
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 850
length of database: 10,358,551
effective HSP length: 16
effective length of query: 834
effective length of database: 10,329,639
effective search space: 8614918926
effective search space used: 8614918926
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)